I am a biological oceanographer at NASA Goddard and a member of the Field Support Group (FSG), part of the Ocean Ecology Laboratory (OEL; Code 616). The FSG collects in situ optical and biogeochemical data for Earth science climate data records and other supporting data records used for ocean color satellite vicarious calibration, data product validation, and bio-optical algorithm development. To this end, the field support group participates in large scale field campaigns, where in situ instruments are deployed to measure the optical properties of the ocean water column as well as collect biogeochemical samples. I have vast experience participating in global oceanographic field campaigns, traveling to such areas as the Chukchi Sea, the Southern Ocean and North Atlantic. My expertise is in IOP measurements and data analysis. My interests also include phytoplankton ecology and diversity throughout the global ocean and modeling phytoplankton community composition using satellite ocean color data. I have also lead multiple efforts to standardize approaches for biogeochemical measurements and analysis. I have extensive experience in public outreach, teaching the public about satellite ocean color. I completed my PhD at the University of Maryland, College Park where my dissertation was focused upon phytoplankton ecology and optical water types in the Chukchi Sea.
Collect, measure and analyze optical and phytoplankton taxonomy samples collected during aquatic field campaigns.
Evaluation of phytoplankton ecology and optical water types in the Chukchi Sea.
A bio-optical laboratory study to develop a more extensive phytoplankton spectral library that will be coupled with satellite radiance products and existing time-series datasets of phytoplankton community composition (PCC) to improve our ability to observe and predict changes in PCC in response to climate change and the consequent impacts on the biological carbon pump. During the project, more than ten different measurements of various optical properties were measured from 51 strains of globally-relevant phytoplankton species and groups. The experiments required multiple months of onsite presence at the Bigelow laboratory. The study has resulted in one publication so far with additional manuscripts in progress.
Quality evaluation of absorption and HPLC pigment data that are submitted to NASA's SseaBASS data repository.
Develop a set of recommended data standards and practices for phytoplankton taxonomic data, which currently do not exist, maximizing the potential for these data to contribute to satellite phytoplankton group algorithm development and validation, to advance ocean ecosystem models, and to enable more informed assessments and predictions of climate impacts on ocean biogeochemistry. identify standards and practices that are flexible enough to be applied not only to SeaBASS but also to any public archive.
I am responsible for using phytoplankton pigments and other measurements of phytoplankton, including microscopy, imaging-in-flow and flow cytometry, to assist in the validation phytoplankton community composition algorithms on a regional scale. These algorithms are used to discern phytoplankton community structure using in situ and ocean color derived products.
One goal of the FSG is to collect sets of in situ optical and biogeochemical data for Earth science climate data records and other supporting data records used for ocean color satellite vicarious calibration, data product validation, and bio-optical algorithm development. To this end, the FSG participates in large-scale field campaigns, where in situ instruments are deployed to measure the optical properties of the ocean water column and biogeochemical samples are collected. Participate in community-driven protocol development workshops. Other duties include participation in and organization for research cruises. My responsibilities include optical property phytoplankton taxonomy measurements and analysis. I also maintain live phytoplankton cultures.
Development and validation of phytoplankton group models and algorothims
Understanding the changes of SST and sea ice extent on the optics and ecosystem of the Chukchi Sea.
Ph.D. Biological Oceanography, University of Maryland, MD. May 2020.
M.S. Marine Biology, University of Charleston, SC. May 2005.
B.S. Marine Biology, Cum Laude, College of Charleston, SC. May 2001.
FIELD WORK EXPERIENCE
Brewin, R. J., S. Sathyendranath, G. Kulk, et al. M.-H. Rio, J. A. Concha, T. G. Bell, A. Bracher, C. Fichot, T. L. Frölicher, M. Galí, D. A. Hansell, T. S. Kostadinov, C. Mitchell, A. R. Neeley, E. Organelli, K. Richardson, C. Rousseaux, F. Shen, D. Stramski, M. Tzortziou, A. J. Watson, C. I. Addey, M. Bellacicco, H. Bouman, D. Carroll, I. Cetinić, G. Dall’Olmo, R. Frouin, J. Hauck, M. Hieronymi, C. Hu, V. Ibello, B. Jönsson, C. E. Kong, Ž. Kovač, M. Laine, J. Lauderdale, S. Lavender, E. Livanou, J. Llort, L. Lorinczi, M. Nowicki, N. A. Pradisty, S. Psarra, D. E. Raitsos, A. B. Ruescas, J. L. Russell, J. Salisbury, R. Sanders, J. D. Shutler, X. Sun, F. G. Taboada, G. H. Tilstone, X. Wei, and D. K. Woolf. 2023. "Ocean carbon from space: Current status and priorities for the next decade." Earth-Science Reviews, 240: 104386 [10.1016/j.earscirev.2023.104386]
Matek, A., S. Bosak, L. Šupraha, et al. A. Neeley, H. Višić, I. Cetinić, and Z. Ljubešić. 2023. "Phytoplankton diversity and chemotaxonomy in contrasting North Pacific ecosystems." PeerJ, 11: e14501 [10.7717/peerj.14501]
Neeley, A. R., M. W. Lomas, A. Mannino, C. Thomas, and R. Vandermeulen. 2022. "Impact of growth phase, pigment adaptation and climate change conditions on the cellular pigment and carbon content of fifty‐one phytoplankton isolates." Journal of Phycology, [10.1111/jpy.13279]
Valente, A., S. Sathyendranath, V. Brotas, et al. S. Groom, M. Grant, T. Jackson, A. Chuprin, M. Taberner, R. Airs, D. Antoine, R. Arnone, W. M. Balch, K. Barker, R. Barlow, S. Bélanger, J.-F. Berthon, Ş. Beşiktepe, Y. Borsheim, A. Bracher, V. Brando, R. J. Brewin, E. Canuti, F. P. Chavez, A. Cianca, H. Claustre, L. Clementson, R. Crout, A. Ferreira, S. Freeman, R. Frouin, C. García-Soto, S. W. Gibb, R. Goericke, R. Gould, N. Guillocheau, S. B. Hooker, C. Hu, M. Kahru, M. Kampel, H. Klein, S. Kratzer, R. Kudela, J. Ledesma, S. Lohrenz, H. Loisel, A. Mannino, V. Martinez-Vicente, P. Matrai, D. McKee, B. G. Mitchell, T. Moisan, E. Montes, F. Muller-Karger, A. Neeley, M. Novak, L. O'Dowd, M. Ondrusek, T. Platt, A. J. Poulton, M. Repecaud, R. Röttgers, T. Schroeder, T. Smyth, D. Smythe-Wright, H. M. Sosik, C. Thomas, R. Thomas, G. Tilstone, A. Tracana, M. Twardowski, V. Vellucci, K. Voss, J. Werdell, M. Wernand, B. Wojtasiewicz, S. Wright, and G. Zibordi. 2022. "A compilation of global bio-optical in situ data for ocean-colour satellite applications – version three." Earth System Science Data, [10.5194/essd-2022-159]
Durkin, C. A., I. Cetinić, M. Estapa, et al. Z. Ljubešić, M. Mucko, A. Neeley, and M. Omand. 2022. "Tracing the path of carbon export in the ocean though DNA sequencing of individual sinking particles." The ISME Journal, [10.1038/s41396-022-01239-2]
Grigoratou, M., E. Montes, A. J. Richardson, et al. J. D. Everett, E. Acevedo‐Trejos, C. Anderson, B. Chen, T. Guy‐Haim, J. Hinners, C. Lindemann, T. M. Garcia, K. O. Möller, F. M. Monteiro, A. R. Neeley, T. D. O'Brien, A. P. Palacz, A. J. Poulton, A. E. Prowe, Á. E. Rodríguez‐Santiago, C. S. Rousseaux, J. Runge, J. F. Saad, I. Santi, R. Stern, A. Soccodato, S. Våge, M. Vogt, S. Zervoudaki, and F. E. Muller‐Karger. 2022. "The Marine Biodiversity Observation Network Plankton Workshops: Plankton Ecosystem Function, Biodiversity, and Forecasting—Research Requirements and Applications." Limnology and Oceanography Bulletin, [10.1002/lob.10479]
Neeley, A., S. E. Beaulieu, C. Proctor, et al. I. Cetinić, J. Futrelle, I. Soto Ramos, H. M. Sosik, E. Devred, L. Karp-Boss, M. Picheral, N. Poulton, C. S. Roesler, and A. Shepherd. 2021. "Standards and practices for reporting plankton and other particle observations from images." 38 [10.1575/1912/27377]
Walcutt, N. L., B. Knörlein, I. Cetinić, et al. Z. Ljubesic, S. Bosak, T. Sgouros, A. L. Montalbano, A. Neeley, S. Menden‐Deuer, and M. M. Omand. 2020. "Assessment of holographic microscopy for quantifying marine particle size and concentration." Limnology and Oceanography: Methods, lom3.10379 [10.1002/lom3.10379]
Neeley, A. R., L. A. Harris, and K. E. Frey. 2018. "Unraveling Phytoplankton Community Dynamics in the Northern Chukchi Sea Under Sea-Ice-Covered and Sea-Ice-Free Conditions." Geophysical Research Letters, 45 (15): 7663-7671 [10.1029/2018gl077684]
Vandermeulen, R. A., A. Mannino, A. Neeley, J. Werdell, and R. Arnone. 2017. "Determining the optimal spectral sampling frequency and uncertainty thresholds for hyperspectral remote sensing of ocean color." Optics Express, 25 (16): A785 [10.1364/oe.25.00a785]
Neeley, A. R., S. A. Freeman, and L. A. Harris. 2015. "Multi-method approach to quantify uncertainties in the measurements of light absorption by particles." Optics Express, 23 (24): 31043 [10.1364/oe.23.031043]
Levine, N. M., D. Toole, A. R. Neeley, et al. N. Bates, S. Doney, and J. Dacey. 2015. "Revising upper-ocean sulfur dynamics near Bermuda: new lessons from 3 years of concentration and rate measurements." Environmental Chemistry, [10.1071/EN15045]
Chaves, J. E., J. Werdell, C. W. Proctor, et al. A. R. Neeley, S. A. Freeman, C. S. Thomas, and S. B. Hooker. 2015. "Assessment of ocean color data records from MODIS-Aqua in the western Arctic Ocean." Deep Sea Research Part II: Topical Studies in Oceanography, 118 (Part A): 32-43 [10.1016/j.dsr2.2015.02.011]
Hermann, M., R. G. Najjar, A. R. Neeley, et al. M. Vila-Costa, J. W. Dacey, G. DiTullio, D. J. Kieber, R. P. Kiene, P. A. Matrai, R. Simó, and M. Vernet. 2012. "Diagnostic modeling of dimethylsulfide production in coastal water west of the Antarctic Peninsula." Continental Shelf Research, 32: 96–109 [10.1016/j.csr.2011.10.017]
Neeley, A. R., C. S. Thomas, S. B. Hooker, and L. Van Heukelem. 2011. "HPLC instrument performance metrics and validation." Phytoplankton Pigments: Characterization, Chemotaxonomy, and Applications in Oceanography, New York: Cambridge University Press, 890, ISBN: 978-1-107-00066-7.
LeBlanc, K., C. E. Hare, Y. Feng, et al. G. Berg, G. DiTullio, A. R. Neeley, I. Bennter, C. Sprengel, A. Beck, S. Sanudo-Wilhelmy, U. Passow, K. Klinck, J. Rowe, S. Wilhelm, C. Brown, and D. Hutchins. 2009. "Distribution of calcifying and silicifying phytoplankton in relation to environmental and biogeochemical parameters during the late stages of the 2005 North East Atlantic Spring Bloom." Biogeosciences, 6: 2155-2179 [10.5194/bg-6-2155-2009]
Lee, P. A., J. R. Rudisill, A. R. Neeley, et al. J. M. Maucher, D. A. Hutchins, Y. Feng, C. E. Hare, K. Leblanc, J. M. Rose, S. W. Wilhem, J. M. Rowe, and G. R. DiTullio. 2009. "Effects of increased pCO2 and temperature on the North Atlantic spring bloom. III. Dimethylsulfoniopropionate ." Marine Ecology Progress Series, 388: 41-49 [10.3354/meps08135]
Neeley, A. R., I. M. Soto Ramos, and C. Proctor. 2023. "Standards and Best Practices for Reporting Flow Cytometry Observations: a technical manual, Version 1.1." Ocean Best Practices 31 (Accepted) [http://dx.doi.org/10.25607/OBP-1864.2]
Lance, V., M. Ondrusek, R. Arnone, et al. S. Ahmed, J. Cannizzaro, A. Chekalyuk, A. El-Habashi, D. Engish, R. Foster, S. Freeman, A. Gilerson, J. Goes, W. Goode, H. Gomes, A. Ibrahim, C. Johnson, C. Kovach, S. Ladner, Z. Lee, J. Lin, K. McKee, A. Neeley, E. Stengel, M. Talone, R. Vandermeulen, K. Voss, W. Jianwei, G. Zibordi, and M. Wang. 2015. "NOAA Technical Report NESDIS 146 – Report for dedicated JPSS VIIRS ocean color calibration/validation cruise." NOAA Technical Report NESDIS 146 [10.7289/V52B8W0Z]
Chaves Cedeno, J. E., P. J. Werdell, C. W. Proctor, et al. A. R. Neeley, S. A. Freeman, C. S. Thomas, and S. B. Hooker. 2014. "Assessment of ocean color data records from MODIS-Aqua in the western Arctic Ocean." Proc. Ocean Optics XXII
Hooker, S. B., L. Clementson, C. S. Thomas, et al. L. Schluter, M. Allerup, J. Ras, H. Claustre, C. Normandeau, J. Cullen, M. Kienast, W. Kozlowski, M. Vernet, S. Chakraborty, S. Lohrenz, M. Tuel, D. Redalje, P. Cartaxana, C. R. Mendes, V. Brotas, S. G. Matondkar, S. G. Parab, A. R. Neeley, and E. S. Egeland. 2012. "The Fifth SeaWiFS HPLC Analysis Round-Robin Experiment (SeaHARRE-5)." NASA Technical Memo. 2012-217503 NASA Goddard Space Flight Center, Greenbelt, Maryland, 98.
Arellano, A., N. Briggs, F. Cao, et al. H. Chen, A. Dave, C. Goyens, F. Henderikx-Freitas, C. Kearney, M. Kheireddine, S. Mishra, A. Neeley, M. Omand, L. Powers, A. Reisinger, S. Rivero, B. Russel, B. Seegers, and R. A. Vandermeulen. 2011. "Portfolio of Measurement, Processing, and Analysis Techniques for Optical Oceanography Data." U. Maine Ocean Optics Course 2011 Report
Neeley, A. R., C. S. Thomas, S. B. Hooker, and L. Van Heukelem. 2011. "HPLC instrument performance metrics and validation." Phytoplankton Pigments Characterization, Chemotaxonomy and Applications in Oceanography 636-649, ISBN: 978-1-107-00066-7.
When Biology and Optics Collide: What we can learn from Microbial Culture Experiments
8 / 9 / 2019SED Director's seminar
Update: Small Working Group, Phytoplankton Taxonomy
Ocean Carbon and Biogeochemistry Summer Workshop
Progress in Data Standards and Practices for Taxon-Resolved Phytoplankton Observations
Targeted updates to the Ocean Optics Protocols
6 / 2019Poster, Ocean Carbon and Biogeochemistry Summer workshop
In situ optical and biogeochemical in- and above-water measurements are critical for calibration and validation of satellite ocean color radiometry data products, and for
refinement of ocean color algorithms. During the SeaWiFS era, NASA commissioned the development of a series of ocean optical measurement protocols, which have served
as international reference standards ever since, and have promoted the collection and assembly of climate quality, ocean optical datasets by the global ocean color
community. Over the past few years, NASA has sponsored several international workshops (sometimes in conjunction with IOCCG) with subject matter experts to update and
develop new community consensus field measurement protocols for ocean color sensor validation. Newly-drafted protocols are available to the international user
community on the IOCCG webpage for a period of time for public comment and access and associate editorial board peer-review, before they are accepted as international
reference standards. Finalized protocols receive a version number and digital object identifier from IODE Ocean Best Practices. The updated protocols are intended to be
“living” documents, periodically updated as methods and technologies advance.
When biology and optics collide: What can we learn from culture experiments
6 / 5 / 2019EuroMarine hyperspectral satellite observation foresight workshop, Oostend, Belgium
In situ measurements for the cal/val of satellite products
10 / 5 / 2017Measuring phytoplankton during the Sea2Space field campaign
5 / 2017Code 610 Colloquium, NASA Goddard
Identifying existing gaps in the detection of phytoplankton community composition from space
2022The Ocean Color Instrument on NASA’s Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission will have increased spectral resolution and expansion into the ultraviolet spectrum, improving estimates of ocean properties. One of the NASA’s PACE mission core objectives is to understand Earth’s Ocean ecosystem through improved estimates of phytoplankton concentration and community composition. Knowledge of community composition is essential for modeling carbon export from the surface ocean and ecological responses to climate variability. Some critical gaps exist when it comes to how we define, measure, and derive phytoplankton community composition (PCC) from ocean color. In this presentation we will discuss the following gaps. First, we must define the term PCC before we can align the data products for both algorithm development and validation. Second, less than a handful of satellite algorithms currently exist that derive any level of PCC from hyperspectral data and go beyond size class paradigm. Third, phytoplankton taxonomy data have been largely under-utilized in PCC algorithm development and validation. Advanced technologies like in-flow-imaging instruments have paved the way for the collection of higher spatial and temporal resolution of taxonomy information. When paired with bio-optical measurements, phytoplankton imagery will prove to be powerful tool for algorithm development and validation. Fourth, the availability of flow cytometry data that are necessary to quantify abundances of small phytoplankton, such as cyanobacteria and picoeukaryotes, is lacking. Lastly, no hyperspectral algorithms exist that partition PCC based on carbon estimates, which would fill a knowledge gap in the ocean biological carbon pump. Moreover, readily available standardized conversion tables to convert phytoplankton biovolume to carbon do not exist and would be necessary to support algorithm development from taxonomy data.
Satellite Ocean Color: A tool for detecting climate change
2021I presented results from my dissertation, showing how a recently developed remote sensing tool can be used to examine signals of ecosystem change in the Chukchi Sea, beyond Chlorophyll a.
Towards improved satellite algorithm validation tools: A revised pigment-based approach for discriminating phytoplankton types
10 / 2018Poster, Ocean Optics, Dubrovnik Croatia
Investigation of the relationships between phytoplankton community structure and environmental parameters in the Chukchi Sea
6 / 2017Poster, Ocean Carbon and Biogeochemistry Summer Workshop, Woods Hole, MA
Approaches to evaluate bio-optical algorithms for determining Phytoplankton Functional Types
2 / 2016Talk, Ocean Sciences Meeting, New Orleans, LA
A report from a community-lead spectral absorption workshop to update the NASA Inherent Optical Properties Protocol for measuring particle absorption
6 / 2015Poster, International Ocean Color Science Meeting, San Francisco, CA
Evaluation of Bio-optical models for discriminating phytoplankton functional types in the Chukchi Sea
6 / 2015Poster, International Ocean Color Science Meeting, San Francisco, CA
Evaluation of Bio-optical models for discriminating phytoplankton functional types in the Chukchi Sea
6 / 2015Poster, Coastal and Estuarine Federation Meeting, Portland, OR
A Pithy tale of spectral absorption uncertainty
2014Poster, Ocean Optics Meeting XXII, Portland, Maine
August 2022 - Present:
Adjunct Professor
Introduction to Oceanography
American University, DC
August-December 2001: Teaching Assistant
Introduction to Evolution, Ecology and Organismal Biology
College of Charleston, SC
Supervisor: Brian Scholtens
January-May 2002: Teaching Assistant
Introduction to Cell and Molecular Biology
College of Charleston, SC
Supervisor: Brian Scholtens
I am a biological oceanographer at NASA Goddard and a member of the Field Support Group (FSG), part of the Ocean Ecology Laboratory (OEL; Code 616). The FSG collects in situ optical and biogeochemical data for Earth science climate data records and other supporting data records used for ocean color satellite vicarious calibration, data product validation, and bio-optical algorithm development. To this end, the field support group participates in large scale field campaigns, where in situ instruments are deployed to measure the optical properties of the ocean water column as well as collect biogeochemical samples. I have vast experience participating in global oceanographic field campaigns, traveling to such areas as the Chukchi Sea, the Southern Ocean and North Atlantic. My expertise is in IOP measurements and data analysis. My interests also include phytoplankton ecology and diversity throughout the global ocean and modeling phytoplankton community composition using satellite ocean color data. I have also lead multiple efforts to standardize approaches for biogeochemical measurements and analysis. I have extensive experience in public outreach, teaching the public about satellite ocean color. I completed my PhD at the University of Maryland, College Park where my dissertation was focused upon phytoplankton ecology and optical water types in the Chukchi Sea.
Brewin, R. J., S. Sathyendranath, G. Kulk, et al. M.-H. Rio, J. A. Concha, T. G. Bell, A. Bracher, C. Fichot, T. L. Frölicher, M. Galí, D. A. Hansell, T. S. Kostadinov, C. Mitchell, A. R. Neeley, E. Organelli, K. Richardson, C. Rousseaux, F. Shen, D. Stramski, M. Tzortziou, A. J. Watson, C. I. Addey, M. Bellacicco, H. Bouman, D. Carroll, I. Cetinić, G. Dall’Olmo, R. Frouin, J. Hauck, M. Hieronymi, C. Hu, V. Ibello, B. Jönsson, C. E. Kong, Ž. Kovač, M. Laine, J. Lauderdale, S. Lavender, E. Livanou, J. Llort, L. Lorinczi, M. Nowicki, N. A. Pradisty, S. Psarra, D. E. Raitsos, A. B. Ruescas, J. L. Russell, J. Salisbury, R. Sanders, J. D. Shutler, X. Sun, F. G. Taboada, G. H. Tilstone, X. Wei, and D. K. Woolf. 2023. "Ocean carbon from space: Current status and priorities for the next decade." Earth-Science Reviews 240 104386 [10.1016/j.earscirev.2023.104386]
Matek, A., S. Bosak, L. Šupraha, et al. A. Neeley, H. Višić, I. Cetinić, and Z. Ljubešić. 2023. "Phytoplankton diversity and chemotaxonomy in contrasting North Pacific ecosystems." PeerJ 11 e14501 [10.7717/peerj.14501]
Neeley, A. R., M. W. Lomas, A. Mannino, C. Thomas, and R. Vandermeulen. 2022. "Impact of growth phase, pigment adaptation and climate change conditions on the cellular pigment and carbon content of fifty‐one phytoplankton isolates." Journal of Phycology [10.1111/jpy.13279]
Valente, A., S. Sathyendranath, V. Brotas, et al. S. Groom, M. Grant, T. Jackson, A. Chuprin, M. Taberner, R. Airs, D. Antoine, R. Arnone, W. M. Balch, K. Barker, R. Barlow, S. Bélanger, J.-F. Berthon, Ş. Beşiktepe, Y. Borsheim, A. Bracher, V. Brando, R. J. Brewin, E. Canuti, F. P. Chavez, A. Cianca, H. Claustre, L. Clementson, R. Crout, A. Ferreira, S. Freeman, R. Frouin, C. García-Soto, S. W. Gibb, R. Goericke, R. Gould, N. Guillocheau, S. B. Hooker, C. Hu, M. Kahru, M. Kampel, H. Klein, S. Kratzer, R. Kudela, J. Ledesma, S. Lohrenz, H. Loisel, A. Mannino, V. Martinez-Vicente, P. Matrai, D. McKee, B. G. Mitchell, T. Moisan, E. Montes, F. Muller-Karger, A. Neeley, M. Novak, L. O'Dowd, M. Ondrusek, T. Platt, A. J. Poulton, M. Repecaud, R. Röttgers, T. Schroeder, T. Smyth, D. Smythe-Wright, H. M. Sosik, C. Thomas, R. Thomas, G. Tilstone, A. Tracana, M. Twardowski, V. Vellucci, K. Voss, J. Werdell, M. Wernand, B. Wojtasiewicz, S. Wright, and G. Zibordi. 2022. "A compilation of global bio-optical in situ data for ocean-colour satellite applications – version three." Earth System Science Data [10.5194/essd-2022-159]
Durkin, C. A., I. Cetinić, M. Estapa, et al. Z. Ljubešić, M. Mucko, A. Neeley, and M. Omand. 2022. "Tracing the path of carbon export in the ocean though DNA sequencing of individual sinking particles." The ISME Journal [10.1038/s41396-022-01239-2]
Grigoratou, M., E. Montes, A. J. Richardson, et al. J. D. Everett, E. Acevedo‐Trejos, C. Anderson, B. Chen, T. Guy‐Haim, J. Hinners, C. Lindemann, T. M. Garcia, K. O. Möller, F. M. Monteiro, A. R. Neeley, T. D. O'Brien, A. P. Palacz, A. J. Poulton, A. E. Prowe, Á. E. Rodríguez‐Santiago, C. S. Rousseaux, J. Runge, J. F. Saad, I. Santi, R. Stern, A. Soccodato, S. Våge, M. Vogt, S. Zervoudaki, and F. E. Muller‐Karger. 2022. "The Marine Biodiversity Observation Network Plankton Workshops: Plankton Ecosystem Function, Biodiversity, and Forecasting—Research Requirements and Applications." Limnology and Oceanography Bulletin [10.1002/lob.10479]
Neeley, A., S. E. Beaulieu, C. Proctor, et al. I. Cetinić, J. Futrelle, I. Soto Ramos, H. M. Sosik, E. Devred, L. Karp-Boss, M. Picheral, N. Poulton, C. S. Roesler, and A. Shepherd. 2021. "Standards and practices for reporting plankton and other particle observations from images." 38 [10.1575/1912/27377]
Walcutt, N. L., B. Knörlein, I. Cetinić, et al. Z. Ljubesic, S. Bosak, T. Sgouros, A. L. Montalbano, A. Neeley, S. Menden‐Deuer, and M. M. Omand. 2020. "Assessment of holographic microscopy for quantifying marine particle size and concentration." Limnology and Oceanography: Methods lom3.10379 [10.1002/lom3.10379]
Neeley, A. R., L. A. Harris, and K. E. Frey. 2018. "Unraveling Phytoplankton Community Dynamics in the Northern Chukchi Sea Under Sea-Ice-Covered and Sea-Ice-Free Conditions." Geophysical Research Letters 45 (15): 7663-7671 [10.1029/2018gl077684]
Vandermeulen, R. A., A. Mannino, A. Neeley, J. Werdell, and R. Arnone. 2017. "Determining the optimal spectral sampling frequency and uncertainty thresholds for hyperspectral remote sensing of ocean color." Optics Express 25 (16): A785 [10.1364/oe.25.00a785]
Neeley, A. R., S. A. Freeman, and L. A. Harris. 2015. "Multi-method approach to quantify uncertainties in the measurements of light absorption by particles." Optics Express 23 (24): 31043 [10.1364/oe.23.031043]
Levine, N. M., D. Toole, A. R. Neeley, et al. N. Bates, S. Doney, and J. Dacey. 2015. "Revising upper-ocean sulfur dynamics near Bermuda: new lessons from 3 years of concentration and rate measurements." Environmental Chemistry [10.1071/EN15045]
Chaves, J. E., J. Werdell, C. W. Proctor, et al. A. R. Neeley, S. A. Freeman, C. S. Thomas, and S. B. Hooker. 2015. "Assessment of ocean color data records from MODIS-Aqua in the western Arctic Ocean." Deep Sea Research Part II: Topical Studies in Oceanography 118 (Part A): 32-43 [10.1016/j.dsr2.2015.02.011]
Hermann, M., R. G. Najjar, A. R. Neeley, et al. M. Vila-Costa, J. W. Dacey, G. DiTullio, D. J. Kieber, R. P. Kiene, P. A. Matrai, R. Simó, and M. Vernet. 2012. "Diagnostic modeling of dimethylsulfide production in coastal water west of the Antarctic Peninsula." Continental Shelf Research 32 96–109 [10.1016/j.csr.2011.10.017]
Neeley, A. R., C. S. Thomas, S. B. Hooker, and L. Van Heukelem. 2011. "HPLC instrument performance metrics and validation." Phytoplankton Pigments: Characterization, Chemotaxonomy, and Applications in Oceanography 890
LeBlanc, K., C. E. Hare, Y. Feng, et al. G. Berg, G. DiTullio, A. R. Neeley, I. Bennter, C. Sprengel, A. Beck, S. Sanudo-Wilhelmy, U. Passow, K. Klinck, J. Rowe, S. Wilhelm, C. Brown, and D. Hutchins. 2009. "Distribution of calcifying and silicifying phytoplankton in relation to environmental and biogeochemical parameters during the late stages of the 2005 North East Atlantic Spring Bloom." Biogeosciences 6 2155-2179 [10.5194/bg-6-2155-2009]
Lee, P. A., J. R. Rudisill, A. R. Neeley, et al. J. M. Maucher, D. A. Hutchins, Y. Feng, C. E. Hare, K. Leblanc, J. M. Rose, S. W. Wilhem, J. M. Rowe, and G. R. DiTullio. 2009. "Effects of increased pCO2 and temperature on the North Atlantic spring bloom. III. Dimethylsulfoniopropionate ." Marine Ecology Progress Series 388 41-49 [10.3354/meps08135]
Neeley, A. R., I. M. Soto Ramos, and C. Proctor. 2023. "Standards and Best Practices for Reporting Flow Cytometry Observations: a technical manual, Version 1.1." Ocean Best Practices (Accepted) 31 [http://dx.doi.org/10.25607/OBP-1864.2]
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Chaves Cedeno, J. E., P. J. Werdell, C. W. Proctor, et al. A. R. Neeley, S. A. Freeman, C. S. Thomas, and S. B. Hooker. 2014. "Assessment of ocean color data records from MODIS-Aqua in the western Arctic Ocean." Proc. Ocean Optics XXII
Hooker, S. B., L. Clementson, C. S. Thomas, et al. L. Schluter, M. Allerup, J. Ras, H. Claustre, C. Normandeau, J. Cullen, M. Kienast, W. Kozlowski, M. Vernet, S. Chakraborty, S. Lohrenz, M. Tuel, D. Redalje, P. Cartaxana, C. R. Mendes, V. Brotas, S. G. Matondkar, S. G. Parab, A. R. Neeley, and E. S. Egeland. 2012. "The Fifth SeaWiFS HPLC Analysis Round-Robin Experiment (SeaHARRE-5)." NASA Technical Memo. 2012-217503 98
Arellano, A., N. Briggs, F. Cao, et al. H. Chen, A. Dave, C. Goyens, F. Henderikx-Freitas, C. Kearney, M. Kheireddine, S. Mishra, A. Neeley, M. Omand, L. Powers, A. Reisinger, S. Rivero, B. Russel, B. Seegers, and R. A. Vandermeulen. 2011. "Portfolio of Measurement, Processing, and Analysis Techniques for Optical Oceanography Data." U. Maine Ocean Optics Course 2011 Report
Neeley, A. R., C. S. Thomas, S. B. Hooker, and L. Van Heukelem. 2011. "HPLC instrument performance metrics and validation." Phytoplankton Pigments Characterization, Chemotaxonomy and Applications in Oceanography 636-649